RNAJunction Database - Junction Profile:9809
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9809: 2AAR_j5_0-A2037_0-G2425_0-C2475_0-U2559_0-C2585

Primary Citation: (from PDB entry 2AAR)

D.BARAM E.PYETAN A.SITTNER T.AUERBACH-NEVO A.BASHAN A.YONATH STRUCTURE OF TRIGGER FACTOR BINDING DOMAIN IN BIOLOGICALLY HOMOLOGOUS COMPLEX WITH EUBACTERIAL RIBOSOME REVEALS ITS CHAPERONE ACTION PROC.NATL.ACAD.SCI.USA V. 102 12017 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:2AAR j5 0-A2037 0-G2425 0-C2475 0-U2559 0-C2585 
NC-IUBMB Classification:Cluster Page
Angles: 21:22:32:48:101:122:132:149:153:165°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.17033Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGGAUAACAGGC 12nt

Strand 2: Chain 0: GACGAAAAGACCC 13nt

Strand 3: Chain 0: GCACCUCGAUGUCGG 15nt

Strand 4: Chain 0: CUGGGUUCAGA 11nt

Strand 5: Chain 0: UCGGUCUCUAUC 12nt

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