RNAJunction Database - Junction Profile:9668
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9668: 1ZZ5_j2_A-G7_B-G24

Primary Citation: (from PDB entry 1ZZ5)

Q.ZHAO F.ZHAO K.F.BLOUNT Q.HAN Y.TOR T.HERMANN MOLECULAR RECOGNITION OF RNA BY NEOMYCIN AND A RESTRICTED NEOMYCIN DERIVATIVE ANGEW.CHEM.INT.ED.ENGL. V. 44 5329 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1ZZ5 j2 A-G7 B-G24 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 158°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.61203Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUGAAGUCGC 10nt

Strand 2: Chain B: GCGUCACAC 9nt

Valid XHTML 1.0 Transitional