RNAJunction Database - Junction Profile:9621

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9621: 1Z58_j5_2-G1684_2-U1723_2-G1742_2-G1747_2-C1971

Primary Citation: (from PDB entry 1Z58)

M.AMIT R.BERISIO D.BARAM J.HARMS A.BASHAN A.YONATH A CREVICE ADJOINING THE RIBOSOME TUNNEL: HINTS FOR COTRANSLATIONAL FOLDING. FEBS LETT. V. 579 3207 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1Z58 j5 2-G1684 2-U1723 2-G1742 2-G1747 2-C1971 
NC-IUBMB Classification:Cluster Page
Angles: 16:22:51:66:138:140:150:154:155:162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.15464Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 2: GUCC 4nt

Strand 2: Chain 2: GGAACUUUGCAAUCUCAC 18nt

Strand 3: Chain 2: GGCG 4nt

Strand 4: Chain 2: AGUGAAUAGGC 11nt

Strand 5: Chain 2: GCGCUGUCU 9nt

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