RNAJunction Database - Junction Profile:9470
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9470: 1YL4_j2_A-G774_A-U801

Primary Citation: (from PDB entry 1YL4)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1YL4 j2 A-G774 A-U801 
NC-IUBMB Classification:HS3HS6Cluster Page
Angles: 100°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.85952Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGGGGAGCAAAC 12nt

Strand 2: Chain A: GGUAGUCCA 9nt

Valid XHTML 1.0 Transitional