RNAJunction Database - Junction Profile:9436
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9436: 1YL3_j3_A-C697_A-G733_A-C756

Primary Citation: (from PDB entry 1YL3)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING. SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1YL3 j3 A-C697 A-G733 A-C756 
NC-IUBMB Classification:Cluster Page
Angles: 27:150:165°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.17756Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCGAACCGGUGGG 13nt

Strand 2: Chain A: GGCCAGG 7nt

Strand 3: Chain A: CCCUCGGAUGAGCU 14nt

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