RNAJunction Database - Junction Profile:942
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 942: 1I94_j5_A-C58_A-C99_A-A310_A-C332_A-G346

Primary Citation: (from PDB entry 1I94)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1I94 j5 A-C58 A-C99 A-A310 A-C332 A-G346 
NC-IUBMB Classification:Cluster Page
Angles: 40:66:70:80:108:109:117:119:127:171°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.81013Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCGGACGGGU 11nt

Strand 2: Chain A: UGCAAGUC 8nt

Strand 3: Chain A: ACAGGG 6nt

Strand 4: Chain A: CCCACU 6nt

Strand 5: Chain A: AGGCAGCA 8nt

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