RNAJunction Database - Junction Profile:9405
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9405: 1YL3_j2_A-A289_A-C343

Primary Citation: (from PDB entry 1YL3)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING. SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1YL3 j2 A-A289 A-C343 
NC-IUBMB Classification:HS5HS7Cluster Page
Angles: 146°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 2.44468Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCGAAAGGUGGG 13nt

Strand 2: Chain A: CCAGCCUAGCC 11nt

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