RNAJunction Database - Junction Profile:8441

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8441: 1Y39_j3_C-G106_C-U131_C-U151

Primary Citation: (from PDB entry 1Y39)

M.S.DUNSTAN D.GUHATHAKURTA D.E.DRAPER G.L.CONN COEVOLUTION OF PROTEIN AND RNA STRUCTURES WITHIN A HIGHLY CONSERVED RIBOSOMAL DOMAIN CHEM.BIOL. V. 12 201 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1Y39 j3 C-G106 C-U131 C-U151 
NC-IUBMB Classification:Cluster Page
Angles: 18:149:165°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.64989Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: CAUUUAAAGAGUGC 14nt

Strand 2: Chain C: AGGAUG 6nt

Strand 3: Chain C: GCUCACU 7nt

Valid XHTML 1.0 Transitional