RNAJunction Database - Junction Profile:8178
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8178: 1XJR_j2_A-C10_A-U37

Primary Citation: (from PDB entry 1XJR)

M.P.ROBERTSON H.IGEL R.BAERTSCH D.HAUSSLER M.ARES JR. W.G.SCOTT THE STRUCTURE OF A RIGOROUSLY CONSERVED RNA ELEMENT WITHIN THE SARS VIRUS GENOME PLOS BIOL. V. 3 86 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1XJR j2 A-C10 A-U37 
NC-IUBMB Classification:HS2HS3Cluster Page
Angles: 145°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.56182Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACCGAGGCC 9nt

Strand 2: Chain A: GGUACAGU 8nt

Valid XHTML 1.0 Transitional