RNAJunction Database - Junction Profile:8140

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8140: 1X9K_j2_A-C5_B-G6

Primary Citation: (from PDB entry 1X9K)

S.ALAM V.GRUM-TOKARS J.KRUCINSKA M.L.KUNDRACIK J.E.WEDEKIND CONFORMATIONAL HETEROGENEITY AT POSITION U37 OF AN ALL-RNA HAIRPIN RIBOZYME WITH IMPLICATIONS FOR METAL BINDING AND THE CATALYTIC STRUCTURE OF THE S-TURN. BIOCHEMISTRY V. 44 14396 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1X9K j2 A-C5 B-G6 
NC-IUBMB Classification:HS4HS4Cluster Page
Angles: 167°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.70268Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGCAGUCCUA 10nt

Strand 2: Chain B: UAGAGAAGCG 10nt

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