RNAJunction Database - Junction Profile:656
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 656: 1HNX_j2_A-G1255_A-C1277

Primary Citation: (from PDB entry 1HNX)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1HNX j2 A-G1255 A-C1277 
NC-IUBMB Classification:HS2HS4Cluster Page
Angles: 21°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.01802Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGCUAAUCGC 10nt

Strand 2: Chain A: GCGAUGCC 8nt

Valid XHTML 1.0 Transitional