RNAJunction Database - Junction Profile:5859
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5859: 1U9S_j2_A-G111_A-C228

Primary Citation: (from PDB entry 1U9S)

A.S.KRASILNIKOV Y.XIAO T.PAN A.MONDRAGON BASIS FOR STRUCTURAL DIVERSITY IN HOMOLOGOUS RNAS. SCIENCE V. 306 104 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1U9S j2 A-G111 A-C228 
NC-IUBMB Classification:2HS3Cluster Page
Angles: 147°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.16332Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGAAAGU 7nt

Strand 2: Chain A: ACCC 4nt

Valid XHTML 1.0 Transitional