RNAJunction Database - Junction Profile:4745

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4745: 1Q29_j3_A-U15_B-A107_B-G118

Primary Citation: (from PDB entry 1Q29)

C.M.DUNHAM J.B.MURRAY W.G.SCOTT A HELICAL TWIST-INDUCED CONFORMATIONAL SWITCH ACTIVATES CLEAVAGE IN THE HAMMERHEAD RIBOZYME. J.MOL.BIOL. V. 332 327 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1Q29 j3 A-U15 B-A107 B-G118 
NC-IUBMB Classification:Cluster Page
Angles: 43:143:165°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.72264Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUCUGAUGA 10nt

Strand 2: Chain B: GAGUCACC 8nt

Strand 3: Chain B: GAAACUC 7nt

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