RNAJunction Database - Junction Profile:456
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 456: 1FKA_j2_A-G641_A-G726

Primary Citation: (from PDB entry 1FKA)

F.SCHLUENZEN A.TOCILJ R.ZARIVACH J.HARMS M.GLUEHMANN D.JANELL A.BASHAN H.BARTELS I.AGMON F.FRANCESCHI A.YONATH STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION CELL (CAMBRIDGE,MASS.) V. 102 615 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1FKA j2 A-G641 A-G726 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 150°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.81399Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUCCACCCG 10nt

Strand 2: Chain A: CGGUGGGAG 9nt

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