RNAJunction Database - Junction Profile:432
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 432: 1FKA_j2_A-A1104_A-G1125

Primary Citation: (from PDB entry 1FKA)

F.SCHLUENZEN A.TOCILJ R.ZARIVACH J.HARMS M.GLUEHMANN D.JANELL A.BASHAN H.BARTELS I.AGMON F.FRANCESCHI A.YONATH STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION CELL (CAMBRIDGE,MASS.) V. 102 615 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1FKA j2 A-A1104 A-G1125 
NC-IUBMB Classification:HS4HS5Cluster Page
Angles: 122°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.46813Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCACUCUA 9nt

Strand 2: Chain A: UAGUUGCC 8nt

Valid XHTML 1.0 Transitional