RNAJunction Database - Junction Profile:3902
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3902: 1NJN_j5_0-A2037_0-G2425_0-C2478_0-G2562_0-C2585

Primary Citation: (from PDB entry 1NJN)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1NJN j5 0-A2037 0-G2425 0-C2478 0-G2562 0-C2585 
NC-IUBMB Classification:Cluster Page
Angles: 9:23:56:60:93:115:148:149:167:170°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.86565Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGGAUAACAG 10nt

Strand 2: Chain 0: GACGAAAAGACCC 13nt

Strand 3: Chain 0: CCUCGAUGUC 10nt

Strand 4: Chain 0: GGUUCAGA 8nt

Strand 5: Chain 0: UCGGUCUCUAUC 12nt

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