RNAJunction Database - Junction Profile:20
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 20: 1BVJ_j2_A-A5_A-C18

Primary Citation: (from PDB entry 1BVJ)

E.V.PUGLISI J.D.PUGLISI HIV-1 A-RICH LOOP MIMICS THE TRNA ANTICODON STRUCTURE NAT.STRUCT.BIOL. V. 5 1033 1998

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1BVJ j2 A-A5 A-C18 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 170°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.89996Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGACGGU 7nt

Strand 2: Chain A: AUCUCG 6nt

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