RNAJunction Database - Junction Profile:18
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 18: 1BGZ_j2_A-U8_A-U16

Primary Citation: (from PDB entry 1BGZ)

K.KALURACHCHI E.P.NIKONOWICZ NMR STRUCTURE DETERMINATION OF THE BINDING SITE FOR RIBOSOMAL PROTEIN S8 FROM ESCHERICHIA COLI 16 S RRNA J.MOL.BIOL. V. 280 639 1998

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1BGZ j2 A-U8 A-U16 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 174°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.99061Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUAAG 5nt

Strand 2: Chain A: CUGC 4nt

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