RNAJunction Database - Junction Profile:15
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 15: 1B36_j2_A-G7_A-A27

Primary Citation: (from PDB entry 1B36)

S.E.BUTCHER T.DIECKMANN J.FEIGON SOLUTION STRUCTURE OF THE LOOP B DOMAIN FROM THE HAIRPIN RIBOZYME NAT.STRUCT.BIOL. V. 6 212 1999

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1B36 j2 A-G7 A-A27 
NC-IUBMB Classification:HS2HS4Cluster Page
Angles: 124°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.39256Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUAUAUUACG 10nt

Strand 2: Chain A: CAGAAACA 8nt

Valid XHTML 1.0 Transitional