RNAJunction Database - Junction Profile:146
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 146: 1C2W_j5_B-C584_B-A668_B-G809_B-G1195_B-A1247

Primary Citation: (from PDB entry 1C2W)

R.BRIMACOMBE F.MUELLER : MUELLER THE 3D ARRANGEMENT OF THE 23S AND 5S RRNA IN THE ESCHERICHIA COLI 50S RIBOSOMAL SUBUNIT BASED ON A CRYO-ELECTRON MICROSCOPIC RECONSTRUCTION AT 7.5 ANGSTROMS RESOLUTION J.MOL.BIOL. V. 298 35 2000

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:5-wayCluster:1C2W j5 B-C584 B-A668 B-G809 B-G1195 B-A1247 
NC-IUBMB Classification:Cluster Page
Angles: 29:50:60:62:67:69:85:98:100:122°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 2.77038Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: UAGACC 6nt

Strand 2: Chain B: GCGACUUA 8nt

Strand 3: Chain B: GGUUCU 6nt

Strand 4: Chain B: AGCGUU 6nt

Strand 5: Chain B: AAGUGCGAAUGC 12nt

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