RNAJunction Database - Junction Profile:1450
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1450: 1J5A_j4_A-G1684_A-U1723_A-G1742_A-C1971

Primary Citation: (from PDB entry 1J5A)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1J5A j4 A-G1684 A-U1723 A-G1742 A-C1971 
NC-IUBMB Classification:Cluster Page
Angles: 23:51:66:135:140:147°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.96565Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUCCC 6nt

Strand 2: Chain A: AGGAACUUUGCAAUCUCACC 20nt

Strand 3: Chain A: GGGCGCAGUGAAUAGGCC 18nt

Strand 4: Chain A: GGCGCUGUCU 10nt

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