RNAJunction Database - Junction Profile:138
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 138: 1C2W_j4_B-C1270_B-U1294_B-G1645_B-A2009

Primary Citation: (from PDB entry 1C2W)

R.BRIMACOMBE F.MUELLER : MUELLER THE 3D ARRANGEMENT OF THE 23S AND 5S RRNA IN THE ESCHERICHIA COLI 50S RIBOSOMAL SUBUNIT BASED ON A CRYO-ELECTRON MICROSCOPIC RECONSTRUCTION AT 7.5 ANGSTROMS RESOLUTION J.MOL.BIOL. V. 298 35 2000

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1C2W j4 B-C1270 B-U1294 B-G1645 B-A2009 
NC-IUBMB Classification:Cluster Page
Angles: 50:55:120:136:166:169°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.7665Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: CUCG 4nt

Strand 2: Chain B: ACGAUAAAG 9nt

Strand 3: Chain B: CGCUUG 6nt

Strand 4: Chain B: CAGU 4nt

Valid XHTML 1.0 Transitional