RNAJunction Database - Junction Profile:125
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 125: 1C2W_j3_B-G2330_B-G2370_B-A2381

Primary Citation: (from PDB entry 1C2W)

R.BRIMACOMBE F.MUELLER : MUELLER THE 3D ARRANGEMENT OF THE 23S AND 5S RRNA IN THE ESCHERICHIA COLI 50S RIBOSOMAL SUBUNIT BASED ON A CRYO-ELECTRON MICROSCOPIC RECONSTRUCTION AT 7.5 ANGSTROMS RESOLUTION J.MOL.BIOL. V. 298 35 2000

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1C2W j3 B-G2330 B-G2370 B-A2381 
NC-IUBMB Classification:Cluster Page
Angles: 49:125:146°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.24941Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: AUGGCAUAAGCCAGCUUGACUG 22nt

Strand 2: Chain B: GCAGGUCAU 9nt

Strand 3: Chain B: CAGGUGC 7nt

Valid XHTML 1.0 Transitional