RNAJunction Database - Junction Profile:11646
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11646: 2I2U_j2_A-C440_A-C492

Primary Citation: (from PDB entry 2I2U)

V.BERK W.ZHANG R.D.PAI J.H.D.CATE STRUCTURAL BASIS FOR MRNA AND TRNA POSITIONING ON THE RIBOSOME. PROC.NATL.ACAD.SCI.USA V. 103 15830 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2I2U j2 A-C440 A-C492 
NC-IUBMB Classification:HS1HS4Cluster Page
Angles: 163°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.27043Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCAGAAGA 8nt

Strand 2: Chain A: UCAGC 5nt

Valid XHTML 1.0 Transitional