RNAJunction Database - Junction Profile:11486
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11486: 2HHH_j4_A-G922_A-A1218_A-G1282_A-G1316

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2HHH j4 A-G922 A-A1218 A-G1282 A-G1316 
NC-IUBMB Classification:Cluster Page
Angles: 46:82:85:104:128:170°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.10956Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UACAA 5nt

Strand 2: Chain A: UGGA 4nt

Strand 3: Chain A: AGUUCG 6nt

Strand 4: Chain A: AGCCGGAA 8nt

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