RNAJunction Database - Junction Profile:1139
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1139: 1I97_j2_A-U1103_A-C1127

Primary Citation: (from PDB entry 1I97)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1I97 j2 A-U1103 A-C1127 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 113°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.27655Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCACUCUAAC 10nt

Strand 2: Chain A: GUUAGUUG 8nt

Valid XHTML 1.0 Transitional