RNAJunction Database - Junction Profile:10602

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10602: 2FDT_j2_A-U6_A-C29

Primary Citation: (from PDB entry 2FDT)

Y.NOMURA S.BABA S.NAKAZATO T.SAKAMOTO M.KAJIKAWA N.OKADA G.KAWAI SOLUTION STRUCTURE AND FUNCTIONAL IMPORTANCE OF A CONSERVED RNA HAIRPIN OF EEL LINE UNAL2 NUCLEIC ACIDS RES. V. 34 5184 2006

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2FDT j2 A-U6 A-C29 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 168°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.68961Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGUACGUC 8nt

Strand 2: Chain A: GUCUGCG 7nt

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