RNAJunction Database - Junction Profile:10165
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10165: 2B8R_j4_A-G7_A-C15_B-G7_B-C15

Primary Citation: (from PDB entry 2B8R)

E.ENNIFAR P.WALTER B.EHRESMANN C.EHRESMANN P.DUMAS CRYSTAL STRUCTURES OF COAXIALLY STACKED KISSING COMPLEXES OF THE HIV-1 RNA DIMERIZATION INITIATION SITE NAT.STRUCT.BIOL. V. 8 1064 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2B8R j4 A-G7 A-C15 B-G7 B-C15 
NC-IUBMB Classification:Cluster Page
Angles: 11:12:169:169:179:179°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.38724Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGAAGC 6nt

Strand 2: Chain A: GCACG 5nt

Strand 3: Chain B: GCACG 5nt

Strand 4: Chain B: UGAAGC 6nt

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