RNAJunction Database - Junction Profile:10063

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10063: 2AZX_j4_D-G507_D-C525_D-A544_D-U565

Primary Citation: (from PDB entry 2AZX)

X.L.YANG F.J.OTERO K.L.EWALT J.LIU M.A.SWAIRJO C.KOHRER U.L.RAJBHANDARY R.J.SKENE D.E.MCREE P.SCHIMMEL TWO CONFORMATIONS OF A CRYSTALLINE HUMAN TRNA SYNTHETASE-TRNA COMPLEX: IMPLICATIONS FOR PROTEIN SYNTHESIS. EMBO J. V. 25 2919 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:2AZX j4 D-G507 D-C525 D-A544 D-U565 
NC-IUBMB Classification:Cluster Page
Angles: 79:89:93:99:164:172°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.87993Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain D: GCGU 4nt

Strand 2: Chain D: CGUGGC 6nt

Strand 3: Chain D: AAGGUUGC 8nt

Strand 4: Chain D: GUCG 4nt

Valid XHTML 1.0 Transitional