All you probably have to do in order to run this example is to click "Submit Query" at the bottom of this page. If you want to run your own set of sequences or you want to customize the output, enter values into the sections one to three of the form below (sections 2 and 3 are optional). For more detailed information consult our help page.
The sequences provided in this example correspond to the 5S loop E region. The alignment is derived from the Rfam entry RF00001.