RNAJunction Database - Junction Profile:9509
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9509: 1Z43_j2_A-G152_A-U175

Primary Citation: (from PDB entry 1Z43)

T.HAINZL S.HUANG A.E.SAUER-ERIKSSON STRUCTURAL INSIGHTS INTO SRP RNA: AN INDUCED FIT MECHANISM FOR SRP ASSEMBLY RNA V. 11 1043 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1LNG j2 B-G152 B-U175 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 159°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.18027Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGUAACCC 8nt

Strand 2: Chain A: GGGAGCA 7nt

Valid XHTML 1.0 Transitional