RNAJunction Database - Junction Profile:9472
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9472: 1YL4_j2_A-U129_A-G227

Primary Citation: (from PDB entry 1YL4)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1HNW j2 A-U129 A-G227 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 159°
Fit Criteria: A
Extracted Structure:Download

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUACCUACCCG 12nt

Strand 2: Chain A: CGGAUGGGCC 10nt

Valid XHTML 1.0 Transitional