RNAJunction Database - Junction Profile:9431
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9431: 1YL3_j2_B-G23_B-G56

Primary Citation: (from PDB entry 1YL3)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING. SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2B66 j2 B-G23 B-G56 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 117°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.13162Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GUGGAACCAC 10nt

Strand 2: Chain B: GUGAAACGC 9nt

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