RNAJunction Database - Junction Profile:9417
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9417: 1YL3_j2_A-G27_A-U511

Primary Citation: (from PDB entry 1YL3)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING. SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2B9N j2 A-G27 A-U511 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.60571Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGAUG 5nt

Strand 2: Chain A: CUGAA 5nt

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