RNAJunction Database - Junction Profile:8582

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8582: 1Y69_j5_0-C593_0-A681_0-G822_0-G1209_0-A1260

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1JZY j5 A-C593 A-A681 A-G822 A-G1209 A-A1260 
NC-IUBMB Classification:Cluster Page
Angles: 66:79:81:86:94:111:112:114:143:160°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.99445Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CUAGACUC 8nt

Strand 2: Chain 0: GGCGACUUAG 10nt

Strand 3: Chain 0: UAGUUCUC 8nt

Strand 4: Chain 0: GAGCGUUC 8nt

Strand 5: Chain 0: GAAGUGCGGAUGCC 14nt

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