RNAJunction Database - Junction Profile:8566

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8566: 1Y69_j3_0-G2309_0-G2349_0-C2360

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1J5A j3 A-G2309 A-G2349 A-C2360 
NC-IUBMB Classification:Cluster Page
Angles: 72:124:160°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.02583Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AAGGUAGAAGGUGGCUUGACUG 22nt

Strand 2: Chain 0: CUCGGGCUU 9nt

Strand 3: Chain 0: CAGGGAG 7nt

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