RNAJunction Database - Junction Profile:8549
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8549: 1Y69_j2_9-C32_9-G53

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VOY j2 A-C32 A-G53 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 141°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.97667Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 9: GGGUCGUG 8nt

Strand 2: Chain 9: CACCCC 6nt

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