RNAJunction Database - Junction Profile:8471
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8471: 1Y69_j2_0-C1844_0-A1869

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJM j2 0-C1844 0-A1869 
NC-IUBMB Classification:HS3HS3Cluster Page
Angles: 162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.12345Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: UCAAGUG 7nt

Strand 2: Chain 0: AAUGAAG 7nt

Valid XHTML 1.0 Transitional