RNAJunction Database - Junction Profile:8402
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8402: 1XNR_j2_A-U249_A-A274

Primary Citation: (from PDB entry 1XNR)

F.V.MURPHY V.RAMAKRISHNAN STRUCTURE OF A PURINE-PURINE WOBBLE BASE PAIR IN THE DECODING CENTER OF THE RIBOSOME. NAT.STRUCT.MOL.BIOL. V. 11 1251 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-U249 A-A274 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 80°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.71185Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUAGUUG 8nt

Strand 2: Chain A: CAAGGC 6nt

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