RNAJunction Database - Junction Profile:8368
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8368: 1XNR_j2_A-A889_A-U905

Primary Citation: (from PDB entry 1XNR)

F.V.MURPHY V.RAMAKRISHNAN STRUCTURE OF A PURINE-PURINE WOBBLE BASE PAIR IN THE DECODING CENTER OF THE RIBOSOME. NAT.STRUCT.MOL.BIOL. V. 11 1251 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2J02 j2 A-A889 A-U905 
NC-IUBMB Classification:HS2HS4Cluster Page
Angles: 154°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.41166Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGAGUACGGC 10nt

Strand 2: Chain A: GCUGAAAC 8nt

Valid XHTML 1.0 Transitional