RNAJunction Database - Junction Profile:8271
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8271: 1XMQ_j2_A-G774_A-U804

Primary Citation: (from PDB entry 1XMQ)

F.V.MURPHY V.RAMAKRISHNAN A.MALKIEWICZ P.F.AGRIS THE ROLE OF MODIFICATIONS IN CODON DISCRIMINATION BY TRNA(LYS)(UUU). NAT.STRUCT.MOL.BIOL. V. 11 1186 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1HNW j2 A-G774 A-U804 
NC-IUBMB Classification:2HS3Cluster Page
Angles: 88°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.6729Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGGGGAGCA 9nt

Strand 2: Chain A: AGUCCA 6nt

Valid XHTML 1.0 Transitional