RNAJunction Database - Junction Profile:8001

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8001: 1W2B_j2_0-G1908_0-A1927

Primary Citation: (from PDB entry 1W2B)

L.FERBITZ T.MAIER H.PATZELT B.BUKAU E.DEUERLING N.BAN TRIGGER FACTOR IN COMPLEX WITH THE RIBOSOME FORMS A MOLECULAR CRADLE FOR NASCENT PROTEINS NATURE V. 431 590 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQL j2 0-G1908 0-A1927 
NC-IUBMB Classification:HS3HS3Cluster Page
Angles: 166°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.54088Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CUGAACACC 9nt

Strand 2: Chain 0: GGACGAAGG 9nt

Valid XHTML 1.0 Transitional