RNAJunction Database - Junction Profile:7956
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7956: 1VS7_j4_A-G944_A-A1236_A-C1296_A-G1334

Primary Citation: (from PDB entry 1VS7)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2I2P j4 A-G944 A-A1236 A-C1296 A-G1334 
NC-IUBMB Classification:Cluster Page
Angles: 22:45:63:63:83:102°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.95306Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUACAAUGGC 10nt

Strand 2: Chain A: GUGGAG 6nt

Strand 3: Chain A: GUCGUAGUCCGG 12nt

Strand 4: Chain A: AAGUCGGAAU 10nt

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