RNAJunction Database - Junction Profile:7883
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7883: 1VS6_j3_B-G1311_B-G1338_B-G1601

Primary Citation: (from PDB entry 1VS6)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:2I2V j3 B-G1311 B-G1338 B-G1601 
NC-IUBMB Classification:Cluster Page
Angles: 68:89:149°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.91811Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: AGGGUGAGUCGA 12nt

Strand 2: Chain B: GGGUUCCU 8nt

Strand 3: Chain B: UCGUACC 7nt

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