RNAJunction Database - Junction Profile:7673
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7673: 1VQP_j2_0-C1854_0-U1871

Primary Citation: (from PDB entry 1VQP)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQL j2 0-C1854 0-U1871 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 69°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.83288Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: ACUCGUACGGU 11nt

Strand 2: Chain 0: ACCGCAAAU 9nt

Valid XHTML 1.0 Transitional