RNAJunction Database - Junction Profile:7424
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7424: 1VQM_j5_0-C1889_0-C1946_0-C1965_0-G1970_0-A2010

Primary Citation: (from PDB entry 1VQM)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1VQL j5 0-C1889 0-C1946 0-C1965 0-G1970 0-A2010 
NC-IUBMB Classification:Cluster Page
Angles: 18:26:46:58:127:148:152:153:160:172°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.80156Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCGG 4nt

Strand 2: Chain 0: CCUGC 5nt

Strand 3: Chain 0: UCUU 4nt

Strand 4: Chain 0: AGGUA 5nt

Strand 5: Chain 0: GAAUGG 6nt

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