RNAJunction Database - Junction Profile:7316
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7316: 1VQM_j2_0-A2108_0-U2473

Primary Citation: (from PDB entry 1VQM)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1JJ2 j2 0-A2108 0-U2473 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 158°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.7581Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCUACCCUAG 10nt

Strand 2: Chain 0: CUAUGGAGC 9nt

Valid XHTML 1.0 Transitional