RNAJunction Database - Junction Profile:6905
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6905: 1VQ8_j2_0-G765_0-C893

Primary Citation: (from PDB entry 1VQ8)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1YI2 j2 0-G765 0-C893 
NC-IUBMB Classification:HS2HS5Cluster Page
Angles: 173°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.71763Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGCAACAGCUG 11nt

Strand 2: Chain 0: CCGAAUCC 8nt

Valid XHTML 1.0 Transitional