RNAJunction Database - Junction Profile:6416

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6416: 1VP0_j3_B-G1312_B-C1641_B-U1656

Primary Citation: (from PDB entry 1VP0)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1J5A j3 A-G1312 A-C1641 A-U1656 
NC-IUBMB Classification:Cluster Page
Angles: 44:145:164°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.69342Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: UCCGAGU 7nt

Strand 2: Chain B: CCGUAAGGA 9nt

Strand 3: Chain B: ACUAAGG 7nt

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