RNAJunction Database - Junction Profile:627
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 627: 1HNW_j4_A-A143_A-C178_A-A196_A-C219

Primary Citation: (from PDB entry 1HNW)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1IBL j4 A-A143 A-C178 A-A196 A-C219 
NC-IUBMB Classification:Cluster Page
Angles: 35:72:120:132:155:166°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.784Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCAU 4nt

Strand 2: Chain A: GAGG 4nt

Strand 3: Chain A: AAAGG 5nt

Strand 4: Chain A: CCGC 4nt

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